DSCensor

Loading report..

Highlight Samples

Regex mode off

    Rename Samples

    Click here for bulk input.

    Paste two columns of a tab-delimited table here (eg. from Excel).

    First column should be the old name, second column the new name.

    Regex mode off

      Show / Hide Samples

      Regex mode off

        Export Plots

        px
        px
        X

        Download the raw data used to create the plots in this report below:

        Note that additional data was saved in 1714076325.27664_data when this report was generated.


        Choose Plots

        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        Save Settings

        You can save the toolbox settings for this report to the browser.


        Load Settings

        Choose a saved report profile from the dropdown box below:

        About MultiQC

        This report was generated using MultiQC, version 1.8

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        DSCensor

        Statistics and BUSCOs for the Legume Federation Datastore

        Report generated on 2024-04-25, 08:18 based on data in: /tmp


        DSMetrics

        DSMetrics Basic Statistics and Benchmarking Universal Single-Copy Orthologs (BUSCOs).

        Basic Statistics

        Showing 11/11 rows and 12/19 columns.
        Sample NameGenusSpeciesInfraspeciesScaffoldsScaffold N50Assembly BasesGap BasesContig Basescomplete_buscosmissingDatastoreDownload
        araca.K10017.gnm1
        Arachis
        cardenasii
        K10017
        736
        112461280
        1238081721
        5645652
        1232436069
        5188
        144
        aradu.V14167.gnm1
        Arachis
        duranensis
        V14167
        1507
        110037037
        1084261490
        144239306
        940022184
        5167
        150
        aradu.V14167.gnm2
        Arachis
        duranensis
        V14167
        1580
        108052799
        1081788009
        130085008
        951703001
        5167
        150
        arahy.BaileyII.gnm1
        Arachis
        hypogaea
        BaileyII
        426
        136833719
        2555804451
        5673885
        2550130566
        5237
        112
        arahy.Fuhuasheng.gnm1
        Arachis
        hypogaea
        Fuhuasheng
        20
        137243429
        2508659386
        25312373
        2483347013
        5135
        209
        arahy.Shitouqi.gnm1
        Arachis
        hypogaea
        Shitouqi
        21
        135085854
        2539163406
        761749
        2538401657
        5237
        112
        arahy.Tifrunner.gnm1
        Arachis
        hypogaea
        Tifrunner
        384
        135150084
        2556916893
        3886513
        2553030380
        5231
        118
        arahy.Tifrunner.gnm2
        Arachis
        hypogaea
        Tifrunner
        442
        135027066
        2557413415
        3784971
        2553628444
        5237
        112
        araip.K30076.gnm1
        Arachis
        ipaensis
        K30076
        552
        136175642
        1353826449
        96771514
        1257054935
        5113
        198
        araip.K30076.gnm2
        Arachis
        ipaensis
        K30076
        10
        146950455
        1438654719
        2086049
        1436568670
        5119
        182
        arast.V10309.gnm1
        Arachis
        stenosperma
        V10309
        30
        141817970
        1328990366
        86716621
        1242273745
        5167
        171

        Base Content Plot

        loading..

        Lineage: fabales_odb10

        loading..