DSCensor: MultiQC Report

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If you use plots from MultiQC in a publication or presentation, please cite:

MultiQC: Summarize analysis results for multiple tools and samples in a single report
Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
Bioinformatics (2016)
doi: 10.1093/bioinformatics/btw354
PMID: 27312411

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About MultiQC

This report was generated using MultiQC, version 1.8

You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

MultiQC is published in Bioinformatics:

MultiQC: Summarize analysis results for multiple tools and samples in a single report
Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
Bioinformatics (2016)
doi: 10.1093/bioinformatics/btw354
PMID: 27312411

DSCensor

Statistics and BUSCOs for the Legume Federation Datastore

Report generated on 2024-04-25, 03:09 based on data in: /tmp

Sample Name	Genus	Species	Infraspecies	lineage_dataset	total_buscos	complete_buscos	complete_single_copy	complete_duplicated	fragmented	missing
medsa.XinJiangDaYe.gnm1.ann1	Medicago	sativa	XinJiangDaYe	fabales_odb10	5366	5242	236	5006	48	75
medtr.A17.gnm5.ann1_6	Medicago	truncatula	A17	fabales_odb10	5366	5226	5081	144	64	75
medtr.A17_HM341.gnm4.ann2	Medicago	truncatula	A17_HM341	fabales_odb10	5366	5280	5151	128	26	59
medtr.HM004.gnm1.ann1	Medicago	truncatula	HM004	fabales_odb10	5366	5306	5172	134	26	32
medtr.HM010.gnm1.ann1	Medicago	truncatula	HM010	fabales_odb10	5366	5306	5172	134	21	37
medtr.HM022.gnm1.ann1	Medicago	truncatula	HM022	fabales_odb10	5366	5274	5140	134	21	69
medtr.HM023.gnm1.ann1	Medicago	truncatula	HM023	fabales_odb10	5366	5306	5167	139	26	32
medtr.HM034.gnm1.ann1	Medicago	truncatula	HM034	fabales_odb10	5366	5296	5156	139	26	42
medtr.HM050.gnm1.ann1	Medicago	truncatula	HM050	fabales_odb10	5366	5312	5178	134	21	32
medtr.HM056.gnm1.ann1	Medicago	truncatula	HM056	fabales_odb10	5366	5296	5162	134	21	48
medtr.HM058.gnm1.ann1	Medicago	truncatula	HM058	fabales_odb10	5366	5274	5135	139	32	59
medtr.HM060.gnm1.ann1	Medicago	truncatula	HM060	fabales_odb10	5366	5296	5162	134	32	37
medtr.HM078.gnm1.ann1	Medicago	truncatula	HM078	fabales_odb10	5366	5280	5129	150	21	64
medtr.HM095.gnm1.ann1	Medicago	truncatula	HM095	fabales_odb10	5366	5280	5140	139	37	48
medtr.HM125.gnm1.ann1	Medicago	truncatula	HM125	fabales_odb10	5366	5290	5156	134	21	53
medtr.HM129.gnm1.ann1	Medicago	truncatula	HM129	fabales_odb10	5366	5301	5167	134	26	37
medtr.HM185.gnm1.ann1	Medicago	truncatula	HM185	fabales_odb10	5366	5290	5167	123	26	48
medtr.HM324.gnm1.ann1	Medicago	truncatula	HM324	fabales_odb10	5366	5178	5038	139	85	101
medtr.R108.gnmHiC_1.ann1	Medicago	truncatula	R108	fabales_odb10	5366	5194	5027	166	16	155
medtr.R108_HM340.gnm1.ann1	Medicago	truncatula	R108_HM340	fabales_odb10	5366	4963	4818	144	144	257

Sort	Group	Column	Description	ID	Scale
\|\|	DSMetrics	Genus	Genus	`Genus`	None
\|\|	DSMetrics	Species	Species	`Species`	None
\|\|	DSMetrics	Infraspecies	Infraspecies	`Infraspecies`	None
\|\|	DSMetrics	lineage_dataset	lineage_dataset	`lineage_dataset`	None
\|\|	DSMetrics	total_buscos	total_buscos	`total_buscos`	None
\|\|	DSMetrics	complete_buscos	complete_buscos	`complete_buscos`	None
\|\|	DSMetrics	complete_single_copy	complete_single_copy	`complete_single_copy`	None
\|\|	DSMetrics	complete_duplicated	complete_duplicated	`complete_duplicated`	None
\|\|	DSMetrics	fragmented	fragmented	`fragmented`	None
\|\|	DSMetrics	missing	missing	`missing`	None
\|\|	DSMetrics	Datastore	Datastore	`Datastore`	None
\|\|	DSMetrics	Download	Download	`Download`	None

v1.8

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Lineage: fabales_odb10

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Lineage: fabales_odb10

v1.8

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